Aegilops searsii

Overview

Genus Aegilops
Species searsii
Common Name -
Abbreviation A. searsii
Ploidy Diploid
Chromosome Number 2n=2x=14
Genome Size 5550 Mb
Genome Assemblies 3
Cross Reference NCBI taxon: 4487

Organism Image

Description

The native range of this species is Syria to Jordan. It is an annual and grows primarily in the subtropical biome.

Whole Genomes

Whole Genome Sequences & Annotations for Aegilops searsii

S genes

Aegilops searsii S genes

QueryChromosomeSize(bp)CoordinatestBLASTn HittBLASTn %IDDomain
DUF247II-SΨGWHBFXU00000001.1571561403107790188-107791063Aatlantica_DUF247II-SDUF247
HPS10-SGWHBFXU00000001.1571561403107457527-107457663,
107457737-107457815
LpsS_contig11029-
DUF247I-ZΨGWHBFXU00000002.1750148016698759165-698760373AlongiglumisDUF247I-ZDUF247
DUF247II-ZΨGWHBFXU00000002.1750148016698756533-698757161AlongiglumisDUF247II-ZDUF247
HPS10-ZGWHBFXU00000002.1750148016698758780-698758912,
698758960-698759006
AerianthaHPS10-Z-

Downloads

The Aegilops searsii S gene sequences are available in FASTA format.

CDS and Protein (FASTA file) S-gene_Aegilops_searsii

Publications

Li LF, Zhang ZB, Wang ZH, Li N, Sha Y, Wang XF, Ding N, Li Y, Zhao J, Wu Y, Gong L, Mafessoni F, Levy AA, Liu B. Genome sequences of five Sitopsis species of Aegilops and the origin of polyploid wheat B subgenome. Mol Plant. 2022 Mar 7;15(3):488-503. doi: 10.1016/j.molp.2021.12.019.

© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences