Cenchrus fungigraminus
Overview
| Genus | Cenchrus |
| Species | fungigraminus |
| Common Name | - |
| Abbreviation | C. fungigraminus |
| Ploidy | Allotetraploid |
| Chromosome Number | 2n=4x=28 |
| Genome Size | 2000 Mb |
| Genome Assemblies | 2 |
| Cross Reference | NCBI taxon: 2981182 |
Organism Image
Description
JUJUNCAO (Cenchrus fungigraminus; 2n = 4x = 28) is a Cenchrus grass with the highest biomass production among cultivated plants, and it can be used for mushroom cultivation, animal feed, and biofuel production.
Whole Genomes
Whole Genome Sequences & Annotations for Cenchrus fungigraminus
S genes
Cenchrus fungigraminus gwh_assembly JUJUNCAO S genes
| Query | Chromosome | Size(bp) | Coordinates | tBLASTn Hit | tBLASTn %ID | Domain |
| DUF247I-S | GWHBWDX00000010.1 | 142403189 | 61452710-61454398 | Sspontaneum | 62 | DUF247 |
| DUF247II-SΨ | GWHBWDX00000010.1 | 142403189 | 61802511-61802816 | Ttriandra | 64 | DUF247 |
| HPS10-S | GWHBWDX00000010.1 | 142403189 | 61495423-61495591, 61495722-61495819 | ShybridS1 | 60 | - |
| DUF247I-ZΨ | GWHBWDX00000008.1 | 106282096 | 101910748-101912124 | Ptenuiflora | 72 | DUF247 |
| DUF247II-Z | GWHBWDX00000008.1 | 106282096 | 101937425-101939056 | LpZDUF247-II_chromosome2 | 65 | DUF247 |
| HPS10-Z | GWHBWDX00000008.1 | 106282096 | 101935229-101935265, 101935874-101935986 | Scereale | 63 | - |
Downloads
The Cenchrus fungigraminus S gene sequences are available in FASTA format.
| CDS and Protein (FASTA file) | S-gene_Cenchrus_fungigraminus |
Publications
Zheng H, Wang B, Hua X, Gao R, Wang Y, Zhang Z, Zhang Y, Mei J, Huang Y, Huang Y, Lin H, Zhang X, Lin D, Lan S, Liu Z, Lu G, Wang Z, Ming R, Zhang J, Lin Z. A near-complete genome assembly of the allotetrapolyploid Cenchrus fungigraminus (JUJUNCAO) provides insights into its evolution and C4 photosynthesis. Plant Commun. 2023 Sep 11;4(5):100633. doi: 10.1016/j.xplc.2023.100633.