Description

Fragaria iinumae is a species of strawberry native to Japan and eastern Russia.

In Japan it was first discovered on Mount Nōgōhaku (能郷白山, Nōgōhaku-san) and the name Nōgō Fragaria (ノウゴウイチゴ・能郷苺, Nōgō Ichigo) was given.

All strawberries have a base haploid count of 7 chromosomes. Fragaria iinumae is diploid, having 2 pairs of these chromosomes for a total of 14 chromosomes. Fragaria iinumae is one of the diploid progenitors of the octoploid strawberry.

Whole Genomes

Whole Genome Sequences & Annotations for Fragaria iinumae

• Fragaria iinumae FII_1.0
• Fragaria iinumae FII_r1.1

S genes

Fragaria S genes Nucleotide

• Fragaria viridis cultivar 42 Sa-RNase mRNA, complete cds
• Fragaria viridis cultivar 42 Sb-RNase mRNA, complete cds
• Fragaria nipponica S-RNase mRNA, complete cds

Fragaria S genes Protein

• Fragaria viridis cultivar 42 Sa-RNase protein
• Fragaria viridis cultivar 42 Sb-RNase protein
• Fragaria nipponica S-RNase protein
• Fragaria nipponica S-RNase2 protein
• Fragaria nipponica S-RNase3 protein

Downloads

The Fragaria S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Fragaria

Publications

Edger PP, McKain MR, Yocca AE, Knapp SJ, Qiao Q, Zhang T. Reply to: Revisiting the origin of octoploid strawberry. Nat Genet. 2020 Jan;52(1):5-7. doi: 10.1038/s41588-019-0544-2.

Hirakawa H, Shirasawa K, Kosugi S, Tashiro K, Nakayama S, Yamada M, Kohara M, Watanabe A, Kishida Y, Fujishiro T, Tsuruoka H, Minami C, Sasamoto S, Kato M, Nanri K, Komaki A, Yanagi T, Guoxin Q, Maeda F, Ishikawa M, Kuhara S, Sato S, Tabata S, Isobe SN. Dissection of the octoploid strawberry genome by deep sequencing of the genomes of Fragaria species. DNA Res. 2014;21(2):169-81. doi: 10.1093/dnares/dst049.