Description

Fragaria nubicola is a species of wild strawberry native to the Himalayas. It is of no commercial value.

All strawberries have a base haploid count of 7 chromosomes. Fragaria nubicola is diploid, having 2 pairs of these chromosomes for a total of 14 chromosomes.

Whole Genomes

Whole Genome Sequences & Annotations for Fragaria nubicola

• Fragaria nubicola SCBG Genome v1.0

S genes

Fragaria nubicola SCBG Genome v1.0 S genes

Query	Chr	Size(bp)	Coordinates	Domain
SLF-1	Fnub6	41037063	89658-90860	F-box,F-box associated
SLF-2	Fnub6	41037063	67571-68256,68541-68886	F-box
SLF-3	Fnub6	41037063	749896-749949,750066-750579,750836-751197	F-box,F-box associated
S-RNase	Fnub6	41037063	625279-625204,624982-624813,609999-609550	Ribonuclease T2 family
SLF-4	Fnub6	41037063	772251-773136,773180-773250,773692-773772	F-box associated

Downloads

The Fragaria S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Fragaria

Publications

Feng C, Wang J, Harris AJ, Folta KM, Zhao M, Kang M. Tracing the Diploid Ancestry of the Cultivated Octoploid Strawberry. Mol Biol Evol. 2021 Jan 23;38(2):478-485. doi: 10.1093/molbev/msaa238.