Description

Prunus salicina (syn. Prunus triflora or Prunus thibetica), commonly called the Japanese plum or Chinese plum, is a small deciduous tree native to China. It is now also grown in fruit orchards in Vietnam, Korea, Japan, Israel, the United States, and Australia.

Prunus salicina should not be confused with Prunus mume, a related species also grown in China, Japan, Korea and Vietnam. Prunus japonica is also another tree that is a separate species despite having a Latin name similar to Prunus salicina's common name.

Whole Genomes

Whole Genome Sequences & Annotations for Prunus salicina

• Prunus salicina Sanyueli_v2.0
• Prunus salicina ZGL_assembly

S genes

Prunus salicina Sanyueli_v2.0 S genes

Query	Chr	Size(bp)	Coordinates	Domain
PsaSLF7.4	Chr6	36292479	32829807-32830955	F-box
PsaSLF7.2	Chr6	36292479	32836287-32837765	F-box
PsaSLF7.1	Chr6	36292479	33268448-33269941	F-box; F_box_assoc
PsaSLF7.3	Chr6	36292479	33274938-33276416	F-box
PsaSLF4	Chr6	36292479	33699243-33697873	F-box; F_box_assoc
PsaSLF2	Chr6	36292479	33784750-33786024	F-box; F_box_assoc
PsaSLF1	Chr6	36292479	33822191-33820980	F-box; F_box_assoc
PsaSFB	Chr6	36292479	33824425-33825555	F-box; F_box_assoc
PsaSLF3	Chr6	36292479	33856713-33857936	F-box; F_box_assoc
PsaSLF5	Chr6	36292479	33900514-33899336	F-box; F_box_assoc
S-RNase	Chr6	36292479	33830243-33830168,33829876-33829692,33826993-33826583	RNase_T2

Downloads

The Prunus salicina S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Prunus_salicina

Publications

Liu C, Feng C, Peng W, Hao J, Wang J, Pan J, He Y. Chromosome-level draft genome of a diploid plum (Prunus salicina). Gigascience. 2020 Dec 10;9(12):giaa130. doi: 10.1093/gigascience/giaa130.

Huang Z, Shen F, Chen Y, Cao K, Wang L. Chromosome-scale genome assembly and population genomics provide insights into the adaptation, domestication, and flavonoid metabolism of Chinese plum. Plant J. 2021 Nov;108(4):1174-1192. doi: 10.1111/tpj.15482.

Tan Q, Li S, Zhang Y, Chen M, Wen B, Jiang S, Chen X, Fu X, Li D, Wu H, Wang Y, Xiao W, Li L. Chromosome-level genome assemblies of five Prunus species and genome-wide association studies for key agronomic traits in peach. Hortic Res. 2021 Oct 1;8(1):213. doi: 10.1038/s41438-021-00648-2.

Fang ZZ, Lin-Wang K, Dai H, Zhou DR, Jiang CC, Espley RV, Deng C, Lin YJ, Pan SL, Ye XF. The genome of low-chill Chinese plum "Sanyueli" (Prunus salicina Lindl.) provides insights into the regulation of the chilling requirement of flower buds. Mol Ecol Resour. 2022 Jul;22(5):1919-1938. doi: 10.1111/1755-0998.13585.