Rubus chingii

Overview

Genus Rubus
Species chingii
Common Name -
Abbreviation R. chingii
Ploidy Diploid
Chromosome Number 2n = 14
Genome Size 240 Mb
Genome Assemblies 1
Cross Reference NCBI taxon: 714495

Organism Image

Description

Rubus chingii Hu (R. chingii), referred to as “Fu-Pen-Zi” in Chinese, has great medicinal and dietary values since ancient times. The dried fruits of R. chingii have been widely used in traditional Chinese medicine (TCM) for the treatment of kidney enuresis and urinary frequency for centuries. According to current findings, R. chingii has been reported to contain a variety of chemical constituents, mostly triterpenoids, diterpenoids, flavonoids, and organic acids. These compounds have been demonstrated to be the major bioactive components responsible for pharmacological effects such as anticomplementary, anticancer, antioxidant, antimicrobial, and anti-inflammatory functions.

Whole Genomes

Whole Genome Sequences & Annotations for Rubus chingii

S genes

Rubus chingii S genes

QueryChrSize(bp)CoordinatesBLASTn HitBLASTn %IDDomain

Downloads

The Rubus chingii S gene sequences are available in FASTA format.

CDS and Protein (FASTA file) S-gene_Rubus_chingii

Publications

Wang L, Lei T, Han G, Yue J, Zhang X, Yang Q, Ruan H, Gu C, Zhang Q, Qian T, Zhang N, Qian W, Wang Q, Pang X, Shu Y, Gao L, Wang Y. The chromosome-scale reference genome of Rubus chingii Hu provides insight into the biosynthetic pathway of hydrolyzable tannins. Plant J. 2021 Sep;107(5):1466-1477. doi: 10.1111/tpj.15394.

© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences