Description

Citrus cavaleriei, the Ichang papeda (Chinese: 宜昌橙), is a slow-growing species of papeda that has characteristic lemon-scented foliage and flowers.

It is native to southwestern and west-central China and is likely named for the city of Yichang (宜昌), in China's Hubei province.

The Ichang papeda's main claim to fame is its unusual hardiness. With the exception of Poncirus trifoliata, it is the hardiest citrus plant, tolerating both moderate frost and damp conditions.

Whole Genomes

Whole Genome Sequences & Annotations for Citrus cavaleriei

• Citrus cavaleriei

S genes

Citrus S genes Nucleotide

• Citrus maxima F-box protein mRNA, complete cds, S locus S2C protein(F-box protein)
• Citrus reticulata isolate S2-SLF1 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S2-SLF2 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S2-SLF3 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S2-SLF4 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S2-SLF5 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S2-SLF6 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S2-SLF7 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S2-SLF8 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S2-SLF9 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S2-SLF10 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S2-SLF11 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S2-SLF12 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S2-SLF13 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S2-SLF14 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S30-SLF1 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S30-SLF2 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S30-SLF3 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S30-SLF4 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S30-SLF5 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S30-SLF6 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S30-SLF7 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S30-SLF8a S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S30-SLF8b S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S30-SLF9 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S30-SLF10 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S30-SLF11 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S30-SLF12 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S30-SLF13 S-locus F-box protein gene, complete cds
• Citrus reticulata isolate S30-SLF14 S-locus F-box protein gene, complete cds
• Citrus maxima S1-ribonuclease mRNA, complete cds
• Citrus maxima S2-ribonuclease mRNA, complete cds
• Citrus maxima S3-ribonuclease mRNA, complete cds
• Citrus maxima S4-ribonuclease mRNA, complete cds
• Citrus maxima S5-ribonuclease mRNA, complete cds
• Citrus maxima S6-ribonuclease mRNA, complete cds
• Citrus maxima S7-ribonuclease mRNA, complete cds
• Citrus maxima S8-ribonuclease mRNA, complete cds
• Citrus maxima S9-ribonuclease mRNA, complete cds
• Citrus reticulata S11-ribonuclease mRNA, complete cds
• Citrus cavaleriei S13-ribonuclease mRNA, complete cds
• Citrus medica S14-ribonuclease mRNA, complete cds
• Citrus sinensis SmR-ribonuclease mRNA, complete cds
• Citrus reticulata S10-ribonuclease mRNA, complete cds
• Citrus hassaku Hassaku HSK19371 S-RNase gene for S17-ribonuclease, complete cds, allele: S17
• Citrus hassaku Hassaku HSK17703 S-RNase gene for S8-ribonuclease, complete cds, allele: S8
• Citrus maxima cultivar shatinyu S-RNase mRNA, complete cds
• Citrus maxima ribonuclease T2 mRNA, complete cds
• Citrus maxima Tosabuntan TBN21745 S-RNase gene for S16-ribonuclease, complete cds, allele: S16
• Citrus maxima Banpeiyu BAN25161 S-RNase gene for S2-ribonuclease, complete cds, allele: S2
• Citrus tamurana Hyuganatsu HY9350 S-RNase gene for S15-ribonuclease, complete cds, allele: S15
• Citrus tamurana Hyuganatsu HY11692 S-RNase gene for S5-ribonuclease, complete cds, allele: S5

Citrus S genes Protein

• F-box protein [Citrus maxima]
• S-locus F-box protein [Citrus reticulata], isolate="S2-SLF1"
• S-locus F-box protein [Citrus reticulata], isolate="S2-SLF2"
• S-locus F-box protein [Citrus reticulata], isolate="S2-SLF3"
• S-locus F-box protein [Citrus reticulata], isolate="S2-SLF4"
• S-locus F-box protein [Citrus reticulata], isolate="S2-SLF5"
• S-locus F-box protein [Citrus reticulata], isolate="S2-SLF6"
• S-locus F-box protein [Citrus reticulata], isolate="S2-SLF7"
• S-locus F-box protein [Citrus reticulata], isolate="S2-SLF8"
• S-locus F-box protein [Citrus reticulata], isolate="S2-SLF9"
• S-locus F-box protein [Citrus reticulata], isolate="S2-SLF10"
• S-locus F-box protein [Citrus reticulata], isolate="S2-SLF11"
• S-locus F-box protein [Citrus reticulata], isolate="S2-SLF12"
• S-locus F-box protein [Citrus reticulata], isolate="S2-SLF13"
• S-locus F-box protein [Citrus reticulata], isolate="S2-SLF14"
• S-locus F-box protein [Citrus reticulata], isolate="S30-SLF1"
• S-locus F-box protein [Citrus reticulata], isolate="S30-SLF2"
• S-locus F-box protein [Citrus reticulata], isolate="S30-SLF3"
• S-locus F-box protein [Citrus reticulata], isolate="S30-SLF4"
• S-locus F-box protein [Citrus reticulata], isolate="S30-SLF5"
• S-locus F-box protein [Citrus reticulata], isolate="S30-SLF6"
• S-locus F-box protein [Citrus reticulata], isolate="S30-SLF7"
• S-locus F-box protein [Citrus reticulata], isolate="S30-SLF8a"
• S-locus F-box protein [Citrus reticulata], isolate="S30-SLF8b"
• S-locus F-box protein [Citrus reticulata], isolate="S30-SLF9"
• S-locus F-box protein [Citrus reticulata], isolate="S30-SLF10"
• S-locus F-box protein [Citrus reticulata], isolate="S30-SLF11"
• S-locus F-box protein [Citrus reticulata], isolate="S30-SLF12"
• S-locus F-box protein [Citrus reticulata], isolate="S30-SLF13"
• S-locus F-box protein [Citrus reticulata], isolate="S30-SLF14"
• S1-ribonuclease [Citrus maxima]
• S2-ribonuclease [Citrus maxima]
• S3-ribonuclease [Citrus maxima]
• S4-ribonuclease [Citrus maxima]
• S5-ribonuclease [Citrus maxima]
• S6-ribonuclease [Citrus maxima]
• S7-ribonuclease [Citrus maxima]
• S8-ribonuclease [Citrus maxima]
• S9-ribonuclease [Citrus maxima]
• S11-ribonuclease [Citrus reticulata]
• S13-ribonuclease [Citrus cavaleriei]
• S14-ribonuclease [Citrus medica]
• SmR-ribonuclease [Citrus sinensis]
• S10-ribonuclease [Citrus reticulata]
• S17-ribonuclease [Citrus hassaku]
• S8-ribonuclease [Citrus hassaku]
• S-RNase [Citrus maxima]
• ribonuclease T2 [Citrus maxima]
• S16-ribonuclease [Citrus maxima]
• S2-ribonuclease [Citrus maxima]
• S15-ribonuclease [Citrus tamurana]
• S5-ribonuclease [Citrus tamurana]

Downloads

The Citrus S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Citrus

Publications

Wang X, Xu Y, Zhang S, Cao L, Huang Y, Cheng J, Wu G, Tian S, Chen C, Liu Y, Yu H, Yang X, Lan H, Wang N, Wang L, Xu J, Jiang X, Xie Z, Tan M, Larkin RM, Chen LL, Ma BG, Ruan Y, Deng X, Xu Q. Genomic analyses of primitive, wild and cultivated citrus provide insights into asexual reproduction. Nat Genet. 2017 May;49(5):765-772. doi: 10.1038/ng.3839.

Huang Y, He J, Xu Y, Zheng W, Wang S, Chen P, Zeng B, Yang S, Jiang X, Liu Z, Wang L, Wang X, Liu S, Lu Z, Liu Z, Yu H, Yue J, Gao J, Zhou X, Long C, Zeng X, Guo YJ, Zhang WF, Xie Z, Li C, Ma Z, Jiao W, Zhang F, Larkin RM, Krueger RR, Smith MW, Ming R, Deng X, Xu Q. Pangenome analysis provides insight into the evolution of the orange subfamily and a key gene for citric acid accumulation in citrus fruits. Nat Genet. 2023 Nov;55(11):1964-1975. doi: 10.1038/s41588-023-01516-6.