Citrus garrawayi

Overview

Genus Citrus
Species garrawayi
Common Name Mount White lime
Abbreviation C. garrawayi
Ploidy Diploid
Chromosome Number 2n=2x=18
Genome Size 320 Mb
Genome Assemblies 3
Cross Reference NCBI taxon: 231467

Organism Image

Description

Citrus garrawayi, the Mount White lime, is a tree native to the Cape York region of northern Queensland in Australia. It is an understory tree in tropical rainforests.

Citrus garrawayi is a shrub or small tree up to 15 m (49 ft), with broad lanceolate leaves. Fruits are elongated, yellowish-green with green pulp. The fruits are edible but the species is rare and grows in an isolated location, so there has to date been no commercial use of it.

The species is often included in the genus Microcitrus rather than in the genus Citrus.

Whole Genomes

Whole Genome Sequences & Annotations for Citrus garrawayi

S genes

Citrus garrawayi UN-2024d S genes

QueryChrSize(bp)CoordinatesBLASTn HitBLASTn %IDDomain
SLF1CM100405.12885663127715359-27716462PP719840.1, S30-SLF197F-box; F_box_assoc
SLF2CM100405.12885663127725389-27726513PP719841.1, S30-SLF291F-box; F_box_assoc
SLF3CM100405.12885663127740654-27741775PP719842.1, S30-SLF391F-box; F_box_assoc
SLF4CM100405.12885663127753425-27754537PP719829.1, S2-SLF491F-box; F_box_assoc
SLF5CM100405.12885663127834714-27835838PP719830.1, S2-SLF588F-box; F_box_assoc
SLF6CM100405.12885663127844664-27843540PP719831.1, S2-SLF688F-box; F_box_assoc
SLF7CM100405.12885663127847950-27846817PP719832.1, S2-SLF790F-box; F_box_assoc
SLF8CM100405.12885663127876374-27877513PP719847.1, S30-SLF8a74F-box; F_box_assoc
SLF9CM100405.12885663127882534-27883679PP719834.1, S2-SLF974F-box; F_box_assoc
SLF10CM100405.12885663127927607-27928752PP719835.1, S2-SLF1099F-box; F_box_assoc
SLF12CM100405.12885663127935352-27934237PP719852.1, S30-SLF1299F-box; F_box_assoc
S-RNaseCM100405.12885663127776523-27776278,27776184-27775750MN652898.1, S2-RNase71RNase_T2
SLF1CM100423.12897672727889157-27890257PP719840.1, S30-SLF197F-box; F_box_assoc
SLF2CM100423.12897672727892119-27893243PP719841.1, S30-SLF296F-box; F_box_assoc
SLF3CM100423.12897672727917781-27918902PP719842.1, S30-SLF393F-box; F_box_assoc
SLF4CM100423.12897672727928053-27929180PP719843.1, S30-SLF491F-box; F_box_assoc
SLFxCM100423.12897672727966743-27965637PP719849.1, S30-SLF966F-box; F_box_assoc
SLF10CM100423.12897672727984155-27983028 PP719835.1, S2-SLF1076F-box; F_box_assoc
SLF6CM100423.12897672727992937-27991792PP719845.1, S30-SLF691F-box; F_box_assoc
SLF7CM100423.12897672728007848-28006718PP719832.1, S2-SLF791F-box; F_box_assoc
SLF8CM100423.12897672728015074-28016213PP719847.1, S30-SLF8a74F-box; F_box_assoc
SLF9CM100423.12897672728018749-28019891PP719834.1, S2-SLF974F-box; F_box_assoc
SLF10-2CM100423.12897672728041290-28042435PP719835.1, S2-SLF1099F-box; F_box_assoc
SLF12CM100423.12897672728049056-28047941PP719852.1, S30-SLF1299F-box; F_box_assoc
S-RNaseCM100423.12897672727964189-27964419,27964765-27965193MN652909.1, S13-RNase85RNase_T2

Downloads

The Citrus garrawayi S gene sequences are available in FASTA format.

CDS and Protein (FASTA file) S-gene_Citrus_garrawayi

Publications

Nakandala U, Masouleh AK, Smith MW, Furtado A, Mason P, Constantin L, Henry RJ. Haplotype resolved chromosome level genome assembly of Citrus garrawayi reveals disease resistance and other citrus specific genes. Hortic Res. 2023 Apr 3;10(5):uhad058. doi: 10.1093/hr/uhad058.

© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences