Citrus glauca

Overview

Genus Citrus
Species glauca
Common Name Australian desert lime
Abbreviation C. glauca
Ploidy Diploid
Chromosome Number 2n=2x=18
Genome Size 380 Mb
Genome Assemblies 5
Cross Reference NCBI taxon: 76963

Organism Image

Description

Citrus glauca, commonly known as the desert lime, is a thorny shrub or small tree native to Queensland, New South Wales, and South Australia. The 1889 book The Useful Native Plants of Australia records the common names native kumquat and desert lemon.

Whole Genomes

Whole Genome Sequences & Annotations for Citrus glauca

S genes

Citrus glauca UN-2024c S genes

QueryChrSize(bp)CoordinatesBLASTn HitBLASTn %IDDomain
SLF1CM100414.12629151425114196-25115296PP719840.1, S30-SLF197F-box; F_box_assoc
SLF2CM100414.12629151425117285-25118409PP719841.1, S30-SLF296F-box; F_box_assoc
SLF3CM100414.12629151425123306-25124406PP719842.1, S30-SLF395F-box; F_box_assoc
SLF4CM100414.12629151425151078-25152193PP719843.1, S30-SLF492F-box; F_box_assoc
SLF6CM100414.12629151425220246-25219119PP719845.1, S30-SLF689F-box; F_box_assoc
SLF7CM100414.12629151425241685-25240561PP719832.1, S2-SLF789F-box; F_box_assoc
SLF8CM100414.12629151425256000-25257139PP719847.1, S30-SLF8a75F-box; F_box_assoc
SLF9CM100414.12629151425261046-25262185PP719834.1, S2-SLF973F-box; F_box_assoc
SLF10CM100414.12629151425284384-25285529PP719835.1, S2-SLF1098F-box; F_box_assoc
SLF11CM100414.12629151425287981-25286806PP719851.1, S30-SLF1197F-box; F_box_assoc
SLF12CM100414.12629151425310341-25309220PP719837.1, S2-SLF1298F-box; F_box_assoc
SLF1CM100432.12656914525461429-25462529PP719840.1, S30-SLF197F-box; F_box_assoc
SLF2CM100432.12656914525464497-25465621PP719841.1, S30-SLF297F-box; F_box_assoc
SLF3CM100432.12656914525470520-25471641PP719842.1, S30-SLF395F-box; F_box_assoc
SLF4CM100432.12656914525483881-25485005PP719843.1, S30-SLF491F-box; F_box_assoc
SLF7CM100432.12656914525516806-25517936PP719832.1, S2-SLF792F-box; F_box_assoc
SLF5CM100432.12656914525551312-25552433PP719830.1, S2-SLF584F-box; F_box_assoc
SLF8CM100432.12656914525619567-25620709PP719847.1, S30-SLF8a74F-box; F_box_assoc
SLF9CM100432.12656914525624453-25625592PP719834.1, S2-SLF973F-box; F_box_assoc
SLF10CM100432.12656914525647765-25648910PP719835.1, S2-SLF1098F-box; F_box_assoc
SLF12CM100432.12656914525655506-25654385PP719837.1, S2-SLF1298F-box; F_box_assoc
S-RNaseCM100432.12656914525608038-25608268,25608371-25608823MN652903.1, S7-RNase88RNase T2

Downloads

The Citrus glauca S gene sequences are available in FASTA format.

CDS and Protein (FASTA file) S-gene_Citrus_glauca

Publications

Nakandala U, Masouleh AK, Smith MW, Furtado A, Mason P, Constantin L, Henry RJ. Haplotype resolved chromosome level genome assembly of Citrus glauca reveals disease resistance and other citrus specific genes. Hortic Res. 2023 Apr 3;10(5):uhad058. doi: 10.1093/hr/uhad058.

© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences