Genus | Citrus |
Species | glauca |
Common Name | Australian desert lime |
Abbreviation | C. glauca |
Ploidy | Diploid |
Chromosome Number | 2n=2x=18 |
Genome Size | 380 Mb |
Genome Assemblies | 5 |
Cross Reference | NCBI taxon: 76963 |
Organism Image
Citrus glauca, commonly known as the desert lime, is a thorny shrub or small tree native to Queensland, New South Wales, and South Australia. The 1889 book The Useful Native Plants of Australia records the common names native kumquat and desert lemon.
Citrus glauca UN-2024c S genes
Query | Chr | Size(bp) | Coordinates | BLASTn Hit | BLASTn %ID | Domain |
SLF1 | CM100414.1 | 26291514 | 25114196-25115296 | PP719840.1, S30-SLF1 | 97 | F-box; F_box_assoc |
SLF2 | CM100414.1 | 26291514 | 25117285-25118409 | PP719841.1, S30-SLF2 | 96 | F-box; F_box_assoc |
SLF3 | CM100414.1 | 26291514 | 25123306-25124406 | PP719842.1, S30-SLF3 | 95 | F-box; F_box_assoc |
SLF4 | CM100414.1 | 26291514 | 25151078-25152193 | PP719843.1, S30-SLF4 | 92 | F-box; F_box_assoc |
SLF6 | CM100414.1 | 26291514 | 25220246-25219119 | PP719845.1, S30-SLF6 | 89 | F-box; F_box_assoc |
SLF7 | CM100414.1 | 26291514 | 25241685-25240561 | PP719832.1, S2-SLF7 | 89 | F-box; F_box_assoc |
SLF8 | CM100414.1 | 26291514 | 25256000-25257139 | PP719847.1, S30-SLF8a | 75 | F-box; F_box_assoc |
SLF9 | CM100414.1 | 26291514 | 25261046-25262185 | PP719834.1, S2-SLF9 | 73 | F-box; F_box_assoc |
SLF10 | CM100414.1 | 26291514 | 25284384-25285529 | PP719835.1, S2-SLF10 | 98 | F-box; F_box_assoc |
SLF11 | CM100414.1 | 26291514 | 25287981-25286806 | PP719851.1, S30-SLF11 | 97 | F-box; F_box_assoc |
SLF12 | CM100414.1 | 26291514 | 25310341-25309220 | PP719837.1, S2-SLF12 | 98 | F-box; F_box_assoc |
SLF1 | CM100432.1 | 26569145 | 25461429-25462529 | PP719840.1, S30-SLF1 | 97 | F-box; F_box_assoc |
SLF2 | CM100432.1 | 26569145 | 25464497-25465621 | PP719841.1, S30-SLF2 | 97 | F-box; F_box_assoc |
SLF3 | CM100432.1 | 26569145 | 25470520-25471641 | PP719842.1, S30-SLF3 | 95 | F-box; F_box_assoc |
SLF4 | CM100432.1 | 26569145 | 25483881-25485005 | PP719843.1, S30-SLF4 | 91 | F-box; F_box_assoc |
SLF7 | CM100432.1 | 26569145 | 25516806-25517936 | PP719832.1, S2-SLF7 | 92 | F-box; F_box_assoc |
SLF5 | CM100432.1 | 26569145 | 25551312-25552433 | PP719830.1, S2-SLF5 | 84 | F-box; F_box_assoc |
SLF8 | CM100432.1 | 26569145 | 25619567-25620709 | PP719847.1, S30-SLF8a | 74 | F-box; F_box_assoc |
SLF9 | CM100432.1 | 26569145 | 25624453-25625592 | PP719834.1, S2-SLF9 | 73 | F-box; F_box_assoc |
SLF10 | CM100432.1 | 26569145 | 25647765-25648910 | PP719835.1, S2-SLF10 | 98 | F-box; F_box_assoc |
SLF12 | CM100432.1 | 26569145 | 25655506-25654385 | PP719837.1, S2-SLF12 | 98 | F-box; F_box_assoc |
S-RNase | CM100432.1 | 26569145 | 25608038-25608268,25608371-25608823 | MN652903.1, S7-RNase | 88 | RNase T2 |
The Citrus glauca S gene sequences are available in FASTA format.
CDS and Protein (FASTA file) | S-gene_Citrus_glauca |
Nakandala U, Masouleh AK, Smith MW, Furtado A, Mason P, Constantin L, Henry RJ. Haplotype resolved chromosome level genome assembly of Citrus glauca reveals disease resistance and other citrus specific genes. Hortic Res. 2023 Apr 3;10(5):uhad058. doi: 10.1093/hr/uhad058.