Description

Capsicum baccatum (Spanish: ají) is a member of the genus Capsicum, and is one of the five domesticated chili pepper species. The fruit tends to be very pungent, and registers 30,000 to 50,000 on the Scoville heat unit scale.

Whole Genomes

Whole Genome Sequences & Annotations for Capsicum baccatum

• Capsicum baccatum 'PBC81 (Isolate)' ASM227188v2

S genes

Capsicum baccatum 'PBC81 (Isolate)' ASM227188v2 S genes

Query	Chromosome	Size(bp)	Coordinates	BLASTn Hit	BLASTn %ID	Domain
SLF13	CM008443.1	259,277,713	119081641-119082810	Solanum tuberosum DM8.1, SLF13	83.8	F-box domain
SLF12	CM008443.1	259,277,713	121092403-121093557	Solanum tuberosum DM8.1, SLF12	80.2	F-box domain
SLF15	CM008443.1	259,277,713	242465356-242464094	Solanum tuberosum DM8.1, SLF15	83.7	F-box domain

Downloads

The Capsicum baccatum S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Capsicum_baccatum

Publications

Kim S, Park J, Yeom SI, Kim YM, Seo E, Kim KT, Kim MS, Lee JM, Cheong K, Shin HS, Kim SB, Han K, Lee J, Park M, Lee HA, Lee HY, Lee Y, Oh S, Lee JH, Choi E, Choi E, Lee SE, Jeon J, Kim H, Choi G, Song H, Lee J, Lee SC, Kwon JK, Lee HY, Koo N, Hong Y, Kim RW, Kang WH, Huh JH, Kang BC, Yang TJ, Lee YH, Bennetzen JL, Choi D. New reference genome sequences of hot pepper reveal the massive evolution of plant disease-resistance genes by retroduplication. Genome Biol. 2017 Nov 1;18(1):210. doi: 10.1186/s13059-017-1341-9.