Description

Iochroma cyaneum is a showy-flowered Andean shrub in the family of the Solanaceae.

Whole Genomes

Whole Genome Sequences & Annotations for Iochroma cyaneum

• Iochroma cyaneum v1.0

S genes

Iochroma cyaneum v1.0 S genes

Query	Chr	Size(bp)	Coordinates	BLASTn Hit	BLASTn %ID	Domain
SLF15	IC1.0ch01	135778923	759159-757894	Solanum tuberosum DM8.1, SLF15	86.8	F-box domain
SLF16	IC1.0ch01	135778923	8574522-8573344	Solanum tuberosum DM8.1, SLF16	80.8	F-box domain
SLF	IC1.0ch01	135778923	52141785-52142966	Nicotiana alata EF420260.1, NaDD10-S6	82.8	F-box domain
SLF5	IC1.0ch01	135778923	56692857-56694023	Petunia hybrida AB933093.1, Sm-SLF5	83.8	F-box domain
SLF12	IC1.0ch01	135778923	58492005-58490881	Solanum tuberosum DM8.1, SLF12	85.1	F-box domain
SLF9	IC1.0ch01	135778923	66825002-66826153	Nicotiana alata EF420252.1, NaDD2-S1	86.5	F-box domain
S-RNase	IC1.0ch01	135778923	67194347-67194105, 67193991-67193566	Solanum tuberosum MZ561409.1, SRNase-S6	86.4	Ribonuclease T2 family
SLF21	IC1.0ch01	135778923	74902976-74904155	Solanum tuberosum DM8.1, SLF21	81.2	F-box domain
SLF21-2	IC1.0ch01	135778923	74977333-74976137	Solanum tuberosum DM8.1, SLF21	81.5	F-box domain
SLF18	IC1.0ch01	135778923	100040234-100041379	Solanum tuberosum DM8.1, SLF18-2	86.5	F-box domain

Downloads

The Iochroma cyaneum S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Iochroma_cyaneum

Publications

Powell AF, Zhang J, Hauser D, Vilela JA, Hu A, Gates DJ, Mueller LA, Li FW, Strickler SR, Smith SD. Genome sequence for the blue-flowered Andean shrub Iochroma cyaneum reveals extensive discordance across the berry clade of Solanaceae. Plant Genome. 2022 Sep;15(3):e20223. doi: 10.1002/tpg2.20223