Physalis pruinosa

Overview

Genus Physalis
Species pruinosa
Common Name Ground cherry or husk tomato
Abbreviation P. pruinosa
Ploidy Diploid
Chromosome Number 2n = 24
Genome Size 1400 Mb
Genome Assemblies 1
Cross Reference NCBI taxon: 304161

Organism Image

Description

Physalis pruinosa is a plant in the genus Physalis in the nightshade family Solanaceae, often referred to as ground cherry or husk tomato. It is a native species in a range extending from northern Mexico through Central America. The plant has a low, spreading habit, and fruits develop in a papery husk, as is characteristic of the genus. While most parts of the plant are toxic to humans due to the presence of solanine and solanidine, the fruit becomes edible (and sweet) once it has ripened to yellow. (The papery husk, a calyx, remains toxic and should not be eaten.) The fruit's flavor is similar in some respects to that of a ripe tomatillo, but notably has a strong flavor of pineapple as well, a fact reflected in the name of a common commercial variety, "Cossack Pineapple". The ripe fruit of Physalis pruinosa var. argentina J. M. Toledo & Barboza is a food source for the Pilagá ethnic group.

It is currently the subject of research into the possibility of developing a genetically modified variety for industrialized agriculture. The research involves CRISPR genome editing which may be able to accelerate the domestication process.

Whole Genomes

Whole Genome Sequences & Annotations for Physalis pruinosa

S genes

Physalis pruinosa Phypru_2.0 S genes

QueryChromosomeSize(bp)CoordinatesBLASTn HitBLASTn %IDDomain
SLF18chr1121367437114670836-114669712Solanum lycopersicum SL2.31, SLF1883.4 F-box domain
SLF19chr3117388568110125080-110123968Solanum tuberosum DM8.1, SLF1987.7 F-box domain

Downloads

The Physalis pruinosa S gene sequences are available in FASTA format.

CDS and Protein (FASTA file) S-gene_Physalis_pruinosa

Publications

He J, Alonge M, Ramakrishnan S, Benoit M, Soyk S, Reem NT, Hendelman A, Van Eck J, Schatz MC, Lippman ZB. Establishing Physalis as a Solanaceae model system enables genetic reevaluation of the inflated calyx syndrome. Plant Cell. 2023 Jan 2;35(1):351-368. doi: 10.1093/plcell/koac305.

© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences