Physalis pubescens

Overview

Genus Physalis
Species pubescens
Common Name Hairy ground-cherry
Abbreviation P. pubescens
Ploidy -
Chromosome Number 2n = 4x = 48
Genome Size 1400 Mb
Genome Assemblies 1
Cross Reference NCBI taxon: 300354

Organism Image

Description

Physalis pubescens is a species of flowering plant in the nightshade family known by many common names, including husk tomato, low ground-cherry and hairy groundcherry in English, and muyaca and capulí in Spanish. It is native from Brazil, but also found in southern half of the United States, Mexico, Central and much of South America. It can be found elsewhere as an introduced species and sometimes a weed. It can grow in many types of habitat, including disturbed areas. This is an annual herb producing a glandular, densely hairy stem up to about 60 cm (24 in) in maximum height from a taproot. The oval or heart-shaped leaves are 3–9 cm (1.2–3.5 in) long and have smooth or toothed edges. The flowers blooming from the leaf axils are bell-shaped and about a centimeter long. They are yellow with five dark spots in the throats, and have five stamens tipped with blue anthers. The five-lobed calyx of sepals at the base of the flower enlarges as the fruit develops, becoming an inflated, ribbed, lanternlike structure 2–4 cm (0.79–1.57 in) long which contains the berry.

Whole Genomes

Whole Genome Sequences & Annotations for Physalis pubescens

S genes

Physalis pubescens gwh_assembly P. floridana S genes

QueryContigSize(bp)CoordinatesBLASTn HitBLASTn %IDDomain
SLF18GWHANUX000000091192923868210963-8209851Solanum tuberosum DM8.1, SLF1882.379F-box domain
SLF19GWHANUX0000001112649098811832337-11831225Solanum tuberosum DM8.1, SLF1987.928F-box domain

Downloads

The Physalis pubescens S gene sequences are available in FASTA format.

CDS and Protein (FASTA file) S-gene_Physalis_pubescens

Publications

Lu J, Luo M, Wang L, Li K, Yu Y, Yang W, Gong P, Gao H, Li Q, Zhao J, Wu L, Zhang M, Liu X, Zhang X, Zhang X, Kang J, Yu T, Li Z, Jiao Y, Wang H, He C. The Physalis floridana genome provides insights into the biochemical and morphological evolution of Physalis fruits. Hortic Res. 2021 Nov 18;8(1):244. doi: 10.1038/s41438-021-00705-w.

© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences