Description

Brassica juncea, commonly brown mustard, Chinese mustard, Indian mustard, Korean green mustard, leaf mustard, Oriental mustard and vegetable mustard, is a species of mustard plant.

Whole Genomes

Whole Genome Sequences & Annotations for Brassica juncea

• Brassica juncea ASM1870372v1

S genes

Brassica juncea ASM1870372v1 S genes

Query	Chromosome	Size(bp)	Coordinates	BLASTp Hit	BLASTp %ID
SRK1	CM031932.1 (A07)	30007521	24187269-24188586,24191483-24191605, 24191707-24191888,24193013-24193223, 24193314-24193551,24193644-24193794, 24193844-24194182	spQ09092SRK6_BRAOV	67
SCR1	CM031932.1 (A07)	30007521	24176283-24176367,24176004-24176194	BAB86356.1	82
SRK2	CM031941.1 (B07)	59341207	51220064-51221345,51219784-51219969, 51219640-51219737,51219359-51219569, 51219030-51219267,51218800-51218950, 51218420-51218719	spP0DH86SRK_ARATH	33
SCR2	CM031941.1 (B07)	59341207	51019941-51020010,51020083-51020300	XP_006301215	45

Downloads

The Brassica juncea S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Brassica_juncea

Publications

Yang J, Liu D, Wang X, Ji C, Cheng F, Liu B, Hu Z, Chen S, Pental D, Ju Y, Yao P, Li X, Xie K, Zhang J, Wang J, Liu F, Ma W, Shopan J, Zheng H, Mackenzie SA, Zhang M. The genome sequence of allopolyploid Brassica juncea and analysis of differential homoeolog gene expression influencing selection. Nat Genet. 2016 Oct;48(10):1225-32. doi: 10.1038/s41588-018-0227-4.

Paritosh K, Yadava SK, Singh P, Bhayana L, Mukhopadhyay A, Gupta V, Bisht NC, Zhang J, Kudrna DA, Copetti D, Wing RA, Reddy Lachagari VB, Pradhan AK, Pental D. A chromosome-scale assembly of allotetraploid Brassica juncea (AABB) elucidates comparative architecture of the A and B genomes. Plant Biotechnol J. 2021 Mar;19(3):602-614. doi: 10.1111/pbi.13492.

Kang L, Qian L, Zheng M, Chen L, Chen H, Yang L, You L, Yang B, Yan M, Gu Y, Wang T, Schiessl SV, An H, Blischak P, Liu X, Lu H, Zhang D, Rao Y, Jia D, Zhou D, Xiao H, Wang Y, Xiong X, Mason AS, Chris Pires J, Snowdon RJ, Hua W, Liu Z. Genomic insights into the origin, domestication and diversification of Brassica juncea. Nat Genet. 2021 Sep;53(9):1392-1402. doi: 10.1038/s41588-021-00922-y.