Brassica repanda
Overview
| Genus | Brassica |
| Species | repanda |
| Common Name | - |
| Abbreviation | B. repanda |
| Ploidy | Diploid |
| Chromosome Number | 2n=2x=22 |
| Genome Size | 617 Mb |
| Genome Assemblies | 1 |
| Cross Reference | NCBI taxon: 308267 |
Organism Image
Description
The native range of this species is SW. Alps. It is a perennial or subshrub and grows primarily in the temperate biome.
S genes
Brassica repanda S genes
| Query | Scaffold | Size(bp) | Coordinates | BLASTp Hit | BLASTp %ID |
| SRK | 378 | 5913277 | 4915046-4916453,4917428-4917559,4917644-4917840,4917905-4918115,4918193-4918430,4918545-4918695,4919059-4919400 | sp|Q09092|SRK6_BRAOV | 79 |
| SCR | 272 | 2837066 | 1958350-1958419,1958517-1958737 | XP_018438641.1 | 90 |
Downloads
The Brassica repanda S gene sequences are available in FASTA format.
| CDS and Protein (FASTA file) | S-gene_Brassica_repanda |
Publications
Guerreiro R, Bonthala VS, Schlüter U, Hoang NV, Triesch S, Schranz ME, Weber APM, Stich B. A genomic panel for studying C3-C4 intermediate photosynthesis in the Brassiceae tribe. Plant Cell Environ. 2023 Nov;46(11):3611-3627. doi: 10.1111/pce.14662.
© 2023 National Genomics Data Center, China National Center for Bioinformation / Beijing Institute of Genomics, Chinese Academy of Sciences