Genus | Triticum |
Species | turgidum |
Common Name | Wild emmer (AABB-genome) |
Abbreviation | T. turgidum |
Ploidy | Tetraploid |
Chromosome Number | 2n=4x=28 |
Genome Size | 9.9 Gb |
Genome Assemblies | 1 |
Cross Reference | NCBI taxon: 4571 |
Triticum turgidum (with its various subspecies being known as pasta wheat, macaroni wheat and durum wheat) is a species of wheat. It is an annual and grows primarily in temperate areas and is native to countries around the eastern Mediterranean, down to Iran and east to Xinjiang, China.
Triticum turgidum Svevo S genes
Query | Chromosome | Size(bp) | Coordinates | tBLASTn Hit | tBLASTn %ID | Domain |
DUF247I-S1 | LT934111.1 | 585266722 | 80061907-80063502 | LpSDUF247-I_chromosome1 | DUF247 | |
DUF247I-S2 | LT934112.1 | 681112512 | 131222758-131224374 | LpSDUF247-I_chromosome1 | DUF247 | |
DUF247II-S1 | LT934111.1 | 585266722 | 78697474-78699093 | LpSDUF247-II_chromosome1 | DUF247 | |
DUF247II-S2Ψ | LT934112.1 | 681112512 | 130984358-130984540 | LpSDUF247-II_chromosome1 | DUF247 | |
HPS10-S1 | LT934111.1 | 585266722 | 80057717-80057840,80057946-80058079 | LpsS_contig12948 | - | |
HPS10-S2 | LT934112.1 | 681112512 | 130990724-130990827,130990935-130991061 | LpsS_contig11029 | - | |
DUF247I-Z1Ψ | LT934113.1 | 775448786 | 736756013-736756549 | LrDUF247I-Z | DUF247 | |
DUF247I-Z2 | LT934114.1 | 790338525 | 728194691-728196280 | LpZDUF247-I_chromosome2 | DUF247 | |
DUF247II-Z1Ψ | LT934113.1 | 775448786 | 736759800-736760549 | LrDUF247II-Z | DUF247 | |
DUF247II-Z2 | LT934114.1 | 790338525 | 728182201-728183874 | LrDUF247II-Z | DUF247 | |
HPS10-Z1 | LT934113.1 | 775448786 | 736757916-736758060,736758184-736758293 | LpsZ_chromosome2 | - | |
HPS10-Z2 | LT934114.1 | 790338525 | 728191843-728191969,728192099-728192199 | AerianthaHPS10-Z | - |
The Triticum turgidum S gene sequences are available in FASTA format.
CDS and Protein (FASTA file) | S-gene_Triticum_turgidum |
Maccaferri M, Harris NS, Twardziok SO, Pasam RK, Gundlach H, Spannagl M, Ormanbekova D, Lux T, Prade VM, Milner SG, Himmelbach A, Mascher M, Bagnaresi P, Faccioli P, Cozzi P, Lauria M, Lazzari B, Stella A, Manconi A, Gnocchi M, Moscatelli M, Avni R, Deek J, Biyiklioglu S, Frascaroli E, Corneti S, Salvi S, Sonnante G, Desiderio F, Marè C, Crosatti C, Mica E, Özkan H, Kilian B, De Vita P, Marone D, Joukhadar R, Mazzucotelli E, Nigro D, Gadaleta A, Chao S, Faris JD, Melo ATO, Pumphrey M, Pecchioni N, Milanesi L, Wiebe K, Ens J, MacLachlan RP, Clarke JM, Sharpe AG, Koh CS, Liang KYH, Taylor GJ, Knox R, Budak H, Mastrangelo AM, Xu SS, Stein N, Hale I, Distelfeld A, Hayden MJ, Tuberosa R, Walkowiak S, Mayer KFX, Ceriotti A, Pozniak CJ, Cattivelli L. Durum wheat genome highlights past domestication signatures and future improvement targets. Nat Genet. 2019 May;51(5):885-895. doi: 10.1038/s41588-019-0381-3.