Description

Malus baccata is an Asian species of apple known by the common names Siberian crab apple, Siberian crab, Manchurian crab apple and Chinese crab apple. It is native to many parts of Asia, but is also grown elsewhere as an ornamental tree and for rootstock. It is used for bonsai. It bears plentiful, fragrant, white flowers and edible red to yellow fruit of about 1 cm (3⁄8 in) diameter.

Whole Genomes

Whole Genome Sequences & Annotations for Malus baccata

• Malus baccata ASM4722560v1
• Malus baccata Genome v1.0

S genes

Malus baccata ASM4722560v1 S genes

Query	Chr	Size(bp)	Coordinates	BLASTn Hit	BLASTn %ID	Domain
SFBB.XVI	Chr17	35192369	31122603-31123790	MdSFBB.XVI-S9	98.91	F-box; F_box_assoc
SFBB.XVII	Chr17	35192369	31163811-31162606	MdSFBB.XVII-S9	99.01	F-box; F_box_assoc
SFBB.XIV	Chr17	35192369	31167097-31168302	MdSFBB.XIV-S9	98.92	F-box; F_box_assoc
SFBB.XIII	Chr17	35192369	31186871-31188052	ON918624.1, PbrSFBB.XIII-S17	97.21	F-box; F_box_assoc
SFBB.Ib	Chr17	35192369	31197646-31196444	MdSFBB.Ib-S9	99.17	F-box; F_box_assoc
SFBB.VI	Chr17	35192369	31232918-31231740	MdSFBB.VI-S9	97.71	F-box; F_box_assoc
SFBB.III	Chr17	35192369	31298119-31299300	MdSFBB.III-S9	98.31	F-box; F_box_assoc
SFBB.II	Chr17	35192369	31388453-31389646	MdSFBB.II-S9	96.57	F-box; F_box_assoc
SFBB.IV	Chr17	35192369	31397643-31398827	MdSFBB.IV-S9	96.96	F-box; F_box_assoc
SFBB.XV	Chr17	35192369	31499521-31500735	MdSFBB.XV-S9	96.38	F-box; F_box_assoc
SFBB.Ia	Chr17	35192369	31599980-31601182	MdSFBB.Ia-S9	92.94	F-box; F_box_assoc
SFBB.XII	Chr17	35192369	31674296-31673124	MdSFBB.XII-S9	94.89	F-box; F_box_assoc
SFBB.XI	Chr17	35192369	31891361-31892545	MdSFBB.XI-S9	96.46	F-box; F_box_assoc
SFBB.X	Chr17	35192369	31913196-31914377	MdSFBB.X-S9	95.69	F-box; F_box_assoc
SFBB.V	Chr17	35192369	32158685-32157507	MdSFBB.V-S9	96.86	F-box; F_box_assoc
SFBB.VII	Chr17	35192369	32186061-32184880	MdSFBB.VII-S9	95.82	F-box; F_box_assoc
SFBB.XIX	Chr17	35192369	32258619-32257387	ON918629.1, PbrSFBB.XIX-S17	96.51	F-box; F_box_assoc
SFBB.XVIII	Chr17	35192369	32271995-32270811	MdSFBB.XVIII-S9	96.03	F-box; F_box_assoc
SFBB.VIII	Chr17	35192369	32325493-32324303	MdSFBB.VIII.1-S9	97.48	F-box; F_box_assoc
SFBB.XXI	Chr17	35192369	33092366-33093715	MdSFBB.XXI-S9	99.04	F-box; F_box_assoc
S-RNase	Chr17	35192369	31998805-31998545,31996673-31996236	KT724706.1, S41-RNase	99.54	RNase_T2

Downloads

The Malus baccata S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Malus_baccata

Publications

Chen X, Li S, Zhang D, Han M, Jin X, Zhao C, Wang S, Xing L, Ma J, Ji J, An N. Sequencing of a Wild Apple (Malus baccata) Genome Unravels the Differences Between Cultivated and Wild Apple Species Regarding Disease Resistance and Cold Tolerance. G3 (Bethesda). 2019 Jul 9;9(7):2051-2060. doi: 10.1534/g3.119.400245.

NCBI BioProject PRJNA1062995.