Description

Honghe papeda (Citrus hongheensis) is a species of eudicot in the family Rutaceae (rue family).

Whole Genomes

Whole Genome Sequences & Annotations for Citrus hongheensis

• Citrus hongheensis v1.0

S genes

Citrus hongheensis v1.0 S genes

Query	Contig	Size(bp)	Coordinates	BLASTn Hit	BLASTn %ID	Domain
SLF1	contig70	1386136	228420-229520	ASM2964120v1, SLF1	98.91	F-box; F_box_assoc
SLF2	contig70	1386136	236892-238016	ASM2964120v1, SLF2	99.733	F-box; F_box_assoc
SLF3	contig70	1386136	242937-244055	ASM2964120v1, SLF3	99.821	F-box; F_box_assoc
SLF2-2	contig70	1386136	254225-255340	ASM2964120v1, SLF2-2	99.373	F-box; F_box_assoc
SLF4	contig70	1386136	284600-285706	ASM2964120v1, SLF4	99.639	F-box; F_box_assoc
SLF5	contig70	1386136	331961-333085	ASM2964120v1, SLF5	99.733	F-box; F_box_assoc
SLF6	contig70	1386136	362318-363451	ASM2964120v1, SLF6	99.824	F-box; F_box_assoc
SLF7	contig70	1386136	390091-388964	ASM2964120v1, SLF7	99.911	F-box; F_box_assoc
SLF9	contig70	1386136	400123-401265	ASM2964120v1, SLF9	99.563	F-box; F_box_assoc
SLF8	contig70	1386136	403680-404819	ASM2964120v1, SLF8	99.737	F-box; F_box_assoc
SLF10	contig70	1386136	428303-429448	ASM2964120v1, SLF10	99.738	F-box; F_box_assoc
SLF11	contig70	1386136	431895-430720	ASM2964120v1, SLF11	99.065	F-box; F_box_assoc
SLF12	contig70	1386136	436038-434917	ASM2964120v1, SLF12	99.376	F-box; F_box_assoc
SLF13	contig70	1386136	452925-454001	ASM2964120v1, SLF13	98.7	F-box; F_box_assoc
SLF12-2ψ	contig630	237731	6312-7417	ASM2964120v1, SLF12	91.608	-
SLF11-2ψ	contig630	237731	10454-11628	ASM2964120v1, SLF11	98.046	-
SLF10-2ψ	contig630	237731	14031-12889	ASM2964120v1, SLF10	99.215	-
SLF8-2	contig630	237731	53563-52418	ASM2964120v1, SLF8	89.762	F-box; F_box_assoc
SLF9-2	contig630	237731	58279-57140	PP719834.1, S2-SLF9	92.563	F-box; F_box_assoc
SLF7-2	contig630	237731	73143-74276	ASM2964120v1, SLF7-2	91.799	F-box; F_box_assoc
SLF6-2	contig630	237731	76459-77598	ASM2964120v1, SLF6	91.674	F-box; F_box_assoc
SLF5-2	contig630	237731	87836-86712	ASM2964120v1, SLF5	90.756	F-box; F_box_assoc
SLF4-2	contig630	237731	128465-127353	PP719829.1, S2-SLF4	92.098	F-box; F_box_assoc
SLF3-2	contig630	237731	158070-156949	PP719842.1, S30-SLF3	92.004	F-box; F_box_assoc
SLF2-3	contig630	237731	184327-183203	PP719841.1, S30-SLF2	92.362	F-box; F_box_assoc
SLF1-2	contig630	237731	213224-212121	PB533_SCSK_HAP2, SLF1	97.82	F-box; F_box_assoc
S-RNase-1	contig70	1386136	303066-303305, 303405-303842	OQ672692.1, S17-RNase	99.6	Ribonuclease T2
S-RNase-2	contig630	237731	111757-112008, 112104-112538	OQ672694.1, S19-RNase	100	Ribonuclease T2

Downloads

The Citrus hongheensis S gene sequences are available in FASTA format.

CDS and Protein (FASTA file)

S-gene_Citrus_hongheensis

Publications

NCBI BioProject PRJNA783764. Citrus hongheensis Genome sequencing and assembly.