Genus | Citrus |
Species | inodora |
Common Name | Large-leaf Australian wild lime |
Abbreviation | C. inodora |
Ploidy | Diploid |
Chromosome Number | 2n=2x=18 |
Genome Size | 300 Mb |
Genome Assemblies | 4 |
Cross Reference | NCBI taxon: 416197 |
Organism Image
Citrus inodora or Microcitrus inodora, commonly known as Russell River lime or large leaf Australian wild lime, is a tree native to the Bellenden-Ker Range in northern Queensland, Australia.
It grows in lowland tropical rainforest. Much of its native habitat has now been cleared for agricultural use, so the species has become quite rare. There has to date been no commercial use of the fruits.
Citrus inodora is a shrub up to 4 m (13 ft) tall. The fruit is egg-shaped and yellowish-green. Leaves and flowers are essentially odourless, lacking the aromatic oils characteristic of the genus.
Citrus inodora UN-2024b S genes
Query | Chr | Size(bp) | Coordinates | BLASTn Hit | BLASTn %ID | Domain |
SLF1 | CM100387.1 | 28733469 | 27556835-27557935 | PP719840.1, S30-SLF1 | 97 | F-box; F_box_assoc |
SLF2a | CM100387.1 | 28733469 | 27559914-27561038 | PP719841.1, S30-SLF2 | 97 | F-box; F_box_assoc |
SLF3 | CM100387.1 | 28733469 | 27565889-27567010 | PP719842.1, S30-SLF3 | 95 | F-box; F_box_assoc |
SLF4 | CM100387.1 | 28733469 | 27570708-27571823 | PP719843.1, S30-SLF4 | 91 | F-box; F_box_assoc |
SLF5 | CM100387.1 | 28733469 | 27589031-27587904 | PP719830.1, S2-SLF5 | 86 | F-box; F_box_assoc |
SLF2b | CM100387.1 | 28733469 | 27601981-27600869 | PP719841.1, S30-SLF2 | 88 | F-box; F_box_assoc |
SLF9aψ | CM100387.1 | 28733469 | 27626562-27627700 | PP719834.1, S2-SLF9 | 74 | - |
SLF7 | CM100387.1 | 28733469 | 27629874-27628744 | PP719832.1, S2-SLF7 | 92 | F-box; F_box_assoc |
SLF8 | CM100387.1 | 28733469 | 27632488-27633630 | PP719847.1, S30-SLF8a | 75 | F-box; F_box_assoc |
SLF9b | CM100387.1 | 28733469 | 27636328-27637467 | PP719834.1, S2-SLF9 | 74 | F-box; F_box_assoc |
SLF10 | CM100387.1 | 28733469 | 27657970-27659115 | PP719835.1, S2-SLF10 | 99 | F-box; F_box_assoc |
SLF11ψ | CM100387.1 | 28733469 | 27661554-27660384 | PP719851.1, S30-SLF11 | 98 | - |
SLF12 | CM100387.1 | 28733469 | 27667242-27666121 | PP719837.1, S2-SLF12 | 99 | F-box; F_box_assoc |
S-RNase | CM100387.1 | 28733469 | 27574785-27574543,27574449-27573997 | MN652903.1, S7-RNase | 98 | RNase T2 |
SLF1 | CM100396.1 | 28277361 | 26580397-26581497 | PP719840.1, S30-SLF1 | 97 | F-box; F_box_assoc |
SLF7 | CM100396.1 | 28277361 | 26684648-26683518 | PP719832.1, S2-SLF7 | 92 | F-box; F_box_assoc |
SLF8 | CM100396.1 | 28277361 | 26687262-26688404 | PP719847.1, S30-SLF8a | 75 | F-box; F_box_assoc |
SLF9 | CM100396.1 | 28277361 | 26691219-26692358 | PP719834.1, S2-SLF9 | 74 | F-box; F_box_assoc |
SLF10 | CM100396.1 | 28277361 | 26712855-26714000 | PP719835.1, S2-SLF10 | 99 | F-box; F_box_assoc |
SLF11ψ | CM100396.1 | 28277361 | 26716443-26715269 | PP719851.1, S30-SLF11 | 98 | - |
SLF12 | CM100396.1 | 28277361 | 26720594-26719473 | PP719837.1, S2-SLF12 | 99 | F-box; F_box_assoc |
SLF2 | CM100396.1 | 28277361 | 26583485-26584609 | PP719841.1, S30-SLF2 | 94 | F-box; F_box_assoc |
SLF3 | CM100396.1 | 28277361 | 26592374-26593495 | PP719842.1, S30-SLF3 | 91 | F-box; F_box_assoc |
SLF4 | CM100396.1 | 28277361 | 26619294-26620409 | PP719843.1, S30-SLF4 | 90 | F-box; F_box_assoc |
SLF5 | CM100396.1 | 28277361 | 26661252-26660128 | PP719830.1, S2-SLF5 | 88 | F-box; F_box_assoc |
SLF6 | CM100396.1 | 28277361 | 26673712-26672588 | PP719845.1, S30-SLF6 | 91 | F-box; F_box_assoc |
The Citrus inodora S gene sequences are available in FASTA format.
CDS and Protein (FASTA file) | S-gene_Citrus_inodora |
Nakandala U, Masouleh AK, Smith MW, Furtado A, Mason P, Constantin L, Henry RJ. Haplotype resolved chromosome level genome assembly of Citrus inodora reveals disease resistance and other citrus specific genes. Hortic Res. 2023 Apr 3;10(5):uhad058. doi: 10.1093/hr/uhad058.