Genus | Citrus |
Species | nobilis |
Common Name | King Orange |
Abbreviation | C. nobilis |
Ploidy | Diploid |
Chromosome Number | 2n=2x=18 |
Genome Size | 310 Mb |
Genome Assemblies | 3 |
Cross Reference | NCBI taxon: 481549 |
Citrus nobilis is an evergreen shrub growing about 4 metres tall. The plant is often cultivated in the tropics for its edible fruit. There are some named varieties.
Whole Genome Sequences & Annotations for Citrus nobilis
Citrus nobilis Kunenbo_kagoshima S genes
Query | Scaffold | Size(bp) | Coordinates | BLASTn Hit | BLASTn %ID | Domain |
SLF13 | BTHO01000007.1 | 36781922 | 907629-906553 | PP719853.1, S30-SLF13 | 98 | F-box; F_box_assoc |
SLF12 | BTHO01000007.1 | 36781922 | 918678-919799 | PP719837.1, S2-SLF12 | 99 | F-box; F_box_assoc |
SLF11 | BTHO01000007.1 | 36781922 | 927098-928273 | PP719851.1, S30-SLF11 | 98 | F-box; F_box_assoc |
SLF10 | BTHO01000007.1 | 36781922 | 930689-929544 | PP719835.1, S2-SLF10 | 99 | F-box; F_box_assoc |
SLF9 | BTHO01000007.1 | 36781922 | 954644-953505 | PP719834.1, S2-SLF9 | 73 | F-box; F_box_assoc |
SLF8 | BTHO01000007.1 | 36781922 | 958599-957457 | PP719847.1, S30-SLF8a | 75 | F-box; F_box_assoc |
SLF7 | BTHO01000007.1 | 36781922 | 962210-963340 | PP719832.1, S2-SLF7 | 92 | F-box; F_box_assoc |
SLF6 | BTHO01000007.1 | 36781922 | 968449-969591 | PP719845.1, S30-SLF6 | 89 | F-box; F_box_assoc |
SLF5 | BTHO01000007.1 | 36781922 | 985489-984365 | PP719830.1, S2-SLF5 | 89 | F-box; F_box_assoc |
SLF3 | BTHO01000007.1 | 36781922 | 1039679-1040800 | PP719842.1, S30-SLF3 | 89 | F-box; F_box_assoc |
SLF3-2 | BTHO01000007.1 | 36781922 | 1046079-1047173 | PP719842.1, S30-SLF3 | 81 | F-box; F_box_assoc |
SLF2 | BTHO01000007.1 | 36781922 | 1093738-1092629 | PP719841.1, S30-SLF2 | 96 | F-box; F_box_assoc |
SLF1 | BTHO01000007.1 | 36781922 | 1097671-1096571 | PP719840.1, S30-SLF1 | 97 | F-box; F_box_assoc |
S-RNase | BTHO01000007.1 | 36781922 | 1015177-1015419,1015507-1015953 | MN652904.1, S8-RNase | 100 | RNase_T2 |
SLF13 | BTHP01000007.1 | 31226643 | 978291-977215 | PP719853.1, S30-SLF13 | 99 | F-box; F_box_assoc |
SLF12 | BTHP01000007.1 | 31226643 | 989167-990288 | PP719837.1, S2-SLF12 | 100 | F-box; F_box_assoc |
SLF11 | BTHP01000007.1 | 31226643 | 993318-994463 | PP719851.1, S30-SLF11 | 99 | F-box; F_box_assoc |
SLF10 | BTHP01000007.1 | 31226643 | 1006018-1004873 | PP719835.1, S2-SLF10 | 99 | F-box; F_box_assoc |
SLF9 | BTHP01000007.1 | 31226643 | 1027218-1026079 | PP719834.1, S2-SLF9 | 74 | F-box; F_box_assoc |
SLF8 | BTHP01000007.1 | 31226643 | 1030885-1029734 | PP719847.1, S30-SLF8a | 75 | F-box; F_box_assoc |
SLF7 | BTHP01000007.1 | 31226643 | 1035949-1037079 | PP719832.1, S2-SLF7 | 93 | F-box; F_box_assoc |
SLF9-2 | BTHP01000007.1 | 31226643 | 1039266-1038127 | PP719834.1, S2-SLF9 | 74 | F-box; F_box_assoc |
SLF2 | BTHP01000007.1 | 31226643 | 1074833-1075945 | PP719841.1, S30-SLF2 | 88 | F-box; F_box_assoc |
SLF5 | BTHP01000007.1 | 31226643 | 1088264-1089391 | PP719830.1, S2-SLF5 | 86 | F-box; F_box_assoc |
SLF4 | BTHP01000007.1 | 31226643 | 1142287-1141172 | PP719843.1, S30-SLF4 | 92 | F-box; F_box_assoc |
SLF3 | BTHP01000007.1 | 31226643 | 1146325-1145225 | PP719842.1, S30-SLF3 | 95 | F-box; F_box_assoc |
SLF2-2 | BTHP01000007.1 | 31226643 | 1152326-1151202 | PP719841.1, S30-SLF2 | 96 | F-box; F_box_assoc |
SLF1 | BTHP01000007.1 | 31226643 | 1172920-1171820 | PP719840.1_S30-SLF1 | 98 | F-box; F_box_assoc |
S-RNase | BTHP01000007.1 | 31226643 | 1138180-1138422,1138516-1138968 | MN652903.1, S7-RNase | 99 | RNase_T2 |
The Citrus nobilis S gene sequences are available in FASTA format.
CDS and Protein (FASTA file) | S-gene_Citrus_nobilis |
NCBI BioProject PRJDB16365, PRJDB16366.